SignalScatter.Rd
Scatter plot of signaling vectors involving features of interest. Returns a ggplot object, colored by mechanism, labeled by cell-cell vector.
SignalScatter( connectome, features, label.threshold = 1, weight.attribute = "weight_sc", ... )
connectome | A connectomic edgelist |
---|---|
features | Features of interest |
label.threshold | Threshold for labeling of plot. Sum of receptor score and ligand score must be greater than this number. |
weight.attribute | Column to use to define edgeweights for network analysis. 'weight_sc or weight_norm'. Defaults to 'weight_sc' |
... | Arguments passed to FilterConnectome |