Seurat input preprocessing

Seurat input preprocessing

prepSeurat(object, assay, min.cells.per.ident, min.cells.per.gene)

Arguments

object

input Seurat object
assay

which assay to use in object
min.cells.per.ident

minimum cells per ident
min.cells.per.gene

minimum cells which must express a gene for it to be considered in connectomics

Value

a processed seurat object